Jincheng Shen, PhD

Research Interests

  • Causal Inference
  • Machine Learning
  • High Dimensional Data Analysis
  • Statistical Genetics
  • Mediation Analysis
  • Personalized Treatment Regime

Languages

  • English

Academic Information

  • Departments: Population Health Sciences - Assistant Professor
  • Divisions: Biostatistics, Epidemiology, Public Health

Education History

Type School Degree
Doctoral Training University of Michigan
Biostatistics
Ph.D.
Graduate Training Tsinghua University
Bioinformatics
M.S.
Undergraduate Tsinghua University
Biological Sciences and Biotechnology
B.S.

Global Impact

Education History

Type School Degree Country
Graduate Training Tsinghua University
Bioinformatics
M.S. China
Undergraduate Tsinghua University
Biological Sciences and Biotechnology
B.S. China

Selected Publications

Journal Article

  1. Lin SH, Merrell KW, Shen J, Verma V, Correa AM, Wang L, Thall PF, Bhooshan N, James SE, Haddock MG, Suntharalingam M, Mehta MP, Liao Z, Cox JD, Komaki R, Mehran RJ, Chuong MD, Hallemeier CL (2017 Apr 25). Multi-institutional analysis of radiation modality use and postoperative outcomes of neoadjuvant chemoradiation for esophageal cancer.LID - S0167-8140(17)30154-8 [pii]LID - 10.1016/j.radonc.2017.04.013 [doi]. (Epub ahead of print) Radiother Oncol.
  2. Dai L, Mehta A, Mordukhovich I, Just AC, Shen J, Hou L, Koutrakis P, Sparrow D, Vokonas PS, Baccarelli AA, Schwartz JD (2017 Feb). Differential DNA methylation and PM2.5 species in a 450K epigenome-wide association study. Epigenetics, 12(2), 139-148.
  3. Lin SH, Merrell KW, Shen J, Verma V, Correa AM, Wang L, Thall PF, Bhooshan N, James SE, Haddock MG, Suntharalingam M, Mehta MP, Liao Z, Cox JD, Komaki R, Mehran RJ, Chuong MD, Hallemeier CL (). Multi-institutional Analysis of Radiation Modality Use and Postoperative Outcomes of Neoadjuvant Chemoradiation for Esophageal Cancer. Radiother Oncol, (Epub).
  4. Shen J, Wang L, Taylor JM (2016 Nov 28). Estimation of the optimal regime in treatment of prostate cancer recurrence from observational data using flexible weighting models.LID - 10.1111/biom.12621 [doi]. (Epub ahead of print) Biometrics.
  5. Nwanaji-Enwerem JC, Colicino E, Trevisi L, Kloog I, Just AC, Shen J, Brennan K, Dereix A, Hou L, Vokonas P, Schwartz J, Baccarelli AA (2016 Apr). Long-term ambient particle exposures and blood DNA methylation age: findings from the VA normative aging study.LID - dvw006 [pii]. Environ Epigenet, 2(2).
  6. Zhou J, Fang CX, Shen J, Schipper MJ, Zalupski MM, Minter RM, Simeone DM, Hart D, Eagle T, Kimmel GW, Vainshtein J, Lawrence TS, Feng M (2015 Jul 09). Definitive Chemoradiation With Full-dose Gemcitabine for Unresectable Pancreatic Cancer: Efficacy of Involved-Field Radiotherapy. (Epub ahead of print) Am J Clin Oncol.
  7. Boonstra PS, Shen J, Taylor JM, Braun TM, Griffith KA, Daignault S, Kalemkerian GP, Lawrence TS, Schipper MJ (2015 Mar). A statistical evaluation of dose expansion cohorts in phase I clinical trials.LID - 10.1093/jnci/dju429 [doi]LID - dju429 [pii]. J Natl Cancer Inst, 107(3).
  8. Wang L, Shen J, Thall PF (2014 Oct 01). A Modified Adaptive Lasso for Identifying Interactions in the Cox Model with the Heredity Constraint. Stat Probab Lett, 93, 126-133.
  9. Arthur AE, Peterson KE, Shen J, Djuric Z, Taylor JM, Hebert JR, Duffy SA, Peterson LA, Bellile EL, Whitfield JR, Chepeha DB, Schipper MJ, Wolf GT, Rozek LS (2014 Sep 01). Diet and proinflammatory cytokine levels in head and neck squamous cell carcinoma. Cancer, 120(17), 2704-12.
  10. Dewaraja YK, Schipper MJ, Shen J, Smith LB, Murgic J, Savas H, Youssef E, Regan D, Wilderman SJ, Roberson PL, Kaminski MS, Avram AM (2014 Jul). Tumor-Absorbed Dose Predicts Progression-Free Survival Following (131)I-Tositumomab Radioimmunotherapy. J Nucl Med, 55(7), 1047-53.
  11. Goodsitt MM, Shenoy A, Shen J, Howard D, Schipper MJ, Wilderman S, Christodoulou E, Chun SY, Dewaraja YK (2014 May). Evaluation of dual energy quantitative CT for determining the spatial distributions of red marrow and bone for dosimetry in internal emitter radiation therapy. Med Phys, 41(5), 051901.
  12. Taylor JM, Shen J, Kennedy EH, Wang L, Schaubel DE (2014 Jan 30). Comparison of methods for estimating the effect of salvage therapy in prostate cancer when treatment is given by indication. Stat Med, 33(2), 257-74.
  13. Qin ZS, Yu J, Shen J, Maher CA, Hu M, Kalyana-Sundaram S, Yu J, Chinnaiyan AM (2010 Jul 02). HPeak: an HMM-based algorithm for defining read-enriched regions in ChIP-Seq data. BMC Bioinformatics, 11, 369.
  14. Zhang S, Xia X, Shen J, Zhou Y, Sun Z (2008 Feb 28). DBMLoc: a Database of proteins with multiple subcellular localizations. BMC Bioinformatics, 9, 127.
  15. Zhang S, Xia X, Shen J, Zhou Y, Sun Z (). Eukaryotic Protein Subcellular Localization Prediction Based on Sequence Conservation and Protein-Protein Interaction. Sheng Wu Hua Xue Yu Sheng Wu Wu Li Jin Zhan, 35(5), 531-5.
  16. Shen J, Zhang S, Sun Z (). GO Molecular Function Coding Based Protein Subcellular Localization Prediction. Chin Sci Bull, 52(16).
  17. Shen J, Liu Y, Liu X, Tang Y (). The Prediction and Analysis of the Spread of SARS Virus Based on Molecular Evolution Model. International Journal of Nonlinear Dynamics and Control, 11, 1-2.