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Shannon Elf

Shannon Elf, PhD

Languages spoken: English

Academic Information

Departments Primary - Internal Medicine , Adjunct - Oncological Sciences

Divisions: Hematology & Hematologic Malignancies

Dr. Shannon Elf is an Associate Professor in the Division of Hematology and Hematologic Malignancies, Department of Internal Medicine at the University of Utah School of Medicine. She holds an adjunct appointment in the Department of Oncological Sciences, is a member of the Center for Iron & Hematology Disorders (CIHD), and a member of the Cell Response and Regulation Program at the Huntsman Cancer Institute.


The overarching goal of Dr. Elf’s research program is to dissect the disease-driving mechanisms underlying myeloproliferative neoplasms (MPNs), specifically myelofibrosis. Her group has particular interest in understanding the underlying pathobiology of disease-driving cells in myelofibrosis, which include MPN stem cells and neoplastic fibrocytes. Current active areas of research in her lab include defining the metabolic requirements for MPN stem cell fitness and how these metabolic phenotypes are regulated by intracellular calcium, defining neoplastic fibrocyte lineage determination and fate in normal hematopoiesis and myelofibrosis, and understanding how neoplastic fibrocytes interact with stromal cells in the bone marrow to support collagen deposition and resulting fibrosis. Long term, the knowledge gained from these studies has the potential to provide important insight into curative therapies for myelofibrosis, which currently do not exist outside of bone marrow transplantation. Dr. Elf’s lab also hopes to use these insights to inform the pathobiology of other rare chronic myeloid diseases, and other fibrotic diseases outside of the bone marrow.


Originally from Sandy Hook, Connecticut, Dr. Elf completed an A.B. in Biology & Music at Bowdoin College in Brunswick, Maine, and a Ph.D. in Molecular & Systems Pharmacology under the mentorship of Dr. Jing Chen at Emory University in Atlanta, Georgia. Her doctoral work focused on novel targets for treatment of myeloid leukemias from the duel perspectives of leukemogenic tyrosine kinase signaling and cancer cell metabolism (Elf et al., Blood, 2011; Shan & Elf et al., Molecular Cell, 2014; Lin & Elf et al., Nature Cell Biology, 2015; Elf et al., Oncogene, 2016). She performed her postdoctoral training at Harvard Medical School with Dr. Ann Mullally, where she elucidated the mechanism by which mutant calreticulin drives myeloproliferative neoplasms (Elf et al., Cancer Discovery, 2016; Elf et al., Blood, 2018). Dr. Elf received a prestigious K99/R00 transition to independence award from the NIH to open her lab in 2019 at the University of Chicago. Since then, her work has been funded by the Leukemia & Lymphoma Society, the American Society of Hematology, Gabrielle’s Angel Foundation, the MPN Research Foundation, and NIH. Dr. Elf moved her lab to the University of Utah/HCI in 2023. She is an active member of the American Society of Hematology and the International Society of Experimental Hematology, is a reviewer for journals including Blood, Leukemia and Nature Communications, and sits on study section for NIH, LLS, DoD, and others.

Education History

Doctoral Training Emory University
PhD
Brigham and Women’s Hospital, Harvard Medical School
Postdoctoral Fellow
Research Fellow Emory University
Graduate Research Fellow
Bowdoin College
AB

Selected Publications

Journal Article

  1. Ibarra J, Elbanna YA, Kurylowicz K, Ciboddo M, Greenbaum HS, Arellano NS, Rodriguez D, Evers M, Bock-Hughes A, Liu C, Smith Q, Lutze J, Baumeister J, Kalmer M, Olschok K, Nicholson B, Silva D, Maxwell L, Dowgielewicz J, Rumi E, Pietra D, Casetti IC, Catricala S, Koschmieder S, Gurbuxani S, Schneider RK, Oakes SA, Elf SE (2021). Type I but Not Type II Calreticulin Mutations Activate the IRE1α/XBP1 Pathway of the Unfolded Protein Response to Drive Myeloproliferative Neoplasms. Blood Cancer Discov, 3(4), 298-315. (Read full article)
  2. Tian T, Fan J, Elf SE (2021). Metabolon: a novel cellular structure that regulates specific metabolic pathways. Cancer Commun (Lond), 41(6), 439-441. (Read full article)
  3. Elf SE, Chen J (2021). R-2-HG in AML… friend or foe? Blood Sci, 3(2), 62-63. (Read full article)
  4. Elf SE (2020). "All Our Wisdom is Stored in the Trees" - Degrading BCR-ABL with Berberis Vulgaris. Clin Cancer Res, 26(15), 3899-3900. (Read full article)
  5. Elf S, Abdelfattah NS, Baral AJ, Beeson D, Rivera JF, Ko A, Florescu N, Birrane G, Chen E, Mullally A (2017). Defining the requirements for the pathogenic interaction between mutant calreticulin and MPL in MPN. Blood, 131(7), 782-786. (Read full article)
  6. Elf S, Lin R, Xia S, Pan Y, Shan C, Wu S, Lonial S, Gaddh M, Arellano ML, Khoury HJ, Khuri FR, Lee BH, Boggon TJ, Fan J, Chen J (2016). Targeting 6-phosphogluconate dehydrogenase in the oxidative PPP sensitizes leukemia cells to antimalarial agent dihydroartemisinin. Oncogene, 36(2), 254-262. (Read full article)
  7. Elf S, Abdelfattah NS, Chen E, Perales-Patn J, Rosen EA, Ko A, Peisker F, Florescu N, Giannini S, Wolach O, Morgan EA, Tothova Z, Losman JA, Schneider RK, Al-Shahrour F, Mullally A (2016). Mutant Calreticulin Requires Both Its Mutant C-terminus and the Thrombopoietin Receptor for Oncogenic Transformation. Cancer Discov, 6(4), 368-81. (Read full article)
  8. Wang J, Luo C, Shan C, You Q, Lu J, Elf S, Zhou Y, Wen Y, Vinkenborg JL, Fan J, Kang H, Lin R, Han D, Xie Y, Karpus J, Chen S, Ouyang S, Luan C, Zhang N, Ding H, Merkx M, Liu H, Chen J, Jiang H, He C (2015). Inhibition of human copper trafficking by a small molecule significantly attenuates cancer cell proliferation. Nat Chem, 7(12), 968-79. (Read full article)
  9. Kang HB, Fan J, Lin R, Elf S, Ji Q, Zhao L, Jin L, Seo JH, Shan C, Arbiser JL, Cohen C, Brat D, Miziorko HM, Kim E, Abdel-Wahab O, Merghoub T, Frhling S, Scholl C, Tamayo P, Barbie DA, Zhou L, Pollack BP, Fisher K, Kudchadkar RR, Lawson DH, Sica G, Rossi M, Lonial S, Khoury HJ, Khuri FR, Lee BH, Boggon TJ, He C, Kang S, Chen J (2015). Metabolic Rewiring by Oncogenic BRAF V600E Links Ketogenesis Pathway to BRAF-MEK1 Signaling. Mol Cell, 59(3), 345-358. (Read full article)
  10. Fan J, Kang HB, Shan C, Elf S, Lin R, Xie J, Gu TL, Aguiar M, Lonning S, Chung TW, Arellano M, Khoury HJ, Shin DM, Khuri FR, Boggon TJ, Kang S, Chen J (2014). Tyr-301 phosphorylation inhibits pyruvate dehydrogenase by blocking substrate binding and promotes the Warburg effect. J Biol Chem, 289(38), 26533-26541. (Read full article)
  11. Shan C, Elf S, Ji Q, Kang HB, Zhou L, Hitosugi T, Jin L, Lin R, Zhang L, Seo JH, Xie J, Tucker M, Gu TL, Sudderth J, Jiang L, DeBerardinis RJ, Wu S, Li Y, Mao H, Chen PR, Wang D, Chen GZ, Lonial S, Arellano ML, Khoury HJ, Khuri FR, Lee BH, Brat DJ, Ye K, Boggon TJ, He C, Kang S, Fan J, Chen J (2014). Lysine acetylation activates 6-phosphogluconate dehydrogenase to promote tumor growth. Mol Cell, 55(4), 552-65. (Read full article)
  12. Shan C, Kang HB, Elf S, Xie J, Gu TL, Aguiar M, Lonning S, Hitosugi T, Chung TW, Arellano M, Khoury HJ, Shin DM, Khuri FR, Boggon TJ, Fan J (2014). Tyr-94 phosphorylation inhibits pyruvate dehydrogenase phosphatase 1 and promotes tumor growth. J Biol Chem, 289(31), 21413-22. (Read full article)
  13. Fan J, Shan C, Kang HB, Elf S, Xie J, Tucker M, Gu TL, Aguiar M, Lonning S, Chen H, Mohammadi M, Britton LM, Garcia BA, Alekovi M, Kang Y, Kaluz S, Devi N, Van Meir EG, Hitosugi T, Seo JH, Lonial S, Gaddh M, Arellano M, Khoury HJ, Khuri FR, Boggon TJ, Kang S, Chen J (2014). Tyr phosphorylation of PDP1 toggles recruitment between ACAT1 and SIRT3 to regulate the pyruvate dehydrogenase complex. Mol Cell, 53(4), 534-48. (Read full article)
  14. Hitosugi T, Zhou L, Elf S, Fan J, Kang HB, Seo JH, Shan C, Dai Q, Zhang L, Xie J, Gu TL, Jin P, Alekovi M, LeRoy G, Kang Y, Sudderth JA, DeBerardinis RJ, Luan CH, Chen GZ, Muller S, Shin DM, Owonikoko TK, Lonial S, Arellano ML, Khoury HJ, Khuri FR, Lee BH, Ye K, Boggon TJ, Kang S, He C, Chen J (2012). Phosphoglycerate mutase 1 coordinates glycolysis and biosynthesis to promote tumor growth. Cancer Cell, 22(5), 585-600. (Read full article)
  15. Elf S, Blevins D, Jin L, Chung TW, Williams IR, Lee BH, Lin JX, Leonard WJ, Taunton J, Khoury HJ, Kang S (2011). p90RSK2 is essential for FLT3-ITD- but dispensable for BCR-ABL-induced myeloid leukemia. Blood, 117(25), 6885-94. (Read full article)
  16. Kang S, Elf S, Lythgoe K, Hitosugi T, Taunton J, Zhou W, Xiong L, Wang D, Muller S, Fan S, Sun SY, Marcus AI, Gu TL, Polakiewicz RD, Chen ZG, Khuri FR, Shin DM, Chen J (2010). p90 ribosomal S6 kinase 2 promotes invasion and metastasis of human head and neck squamous cell carcinoma cells. J Clin Invest, 120(4), 1165-77. (Read full article)
  17. Hitosugi T, Kang S, Vander Heiden MG, Chung TW, Elf S, Lythgoe K, Dong S, Lonial S, Wang X, Chen GZ, Xie J, Gu TL, Polakiewicz RD, Roesel JL, Boggon TJ, Khuri FR, Gilliland DG, Cantley LC, Kaufman J, Chen J (2009). Tyrosine phosphorylation inhibits PKM2 to promote the Warburg effect and tumor growth. Sci Signal, 2(97), ra73. (Read full article)
  18. Sashida G, Liu Y, Elf S, Miyata Y, Ohyashiki K, Izumi M, Menendez S, Nimer SD (2009). ELF4/MEF activates MDM2 expression and blocks oncogene-induced p16 activation to promote transformation. Mol Cell Biol, 29(13), 3687-99. (Read full article)
  19. Kang S, Elf S, Dong S, Hitosugi T, Lythgoe K, Guo A, Ruan H, Lonial S, Khoury HJ, Williams IR, Lee BH, Roesel JL, Karsenty G, Hanauer A, Taunton J, Boggon TJ, Gu TL, Chen J (2009). Fibroblast growth factor receptor 3 associates with and tyrosine phosphorylates p90 RSK2, leading to RSK2 activation that mediates hematopoietic transformation. Mol Cell Biol, 29(8), 2105-17. (Read full article)
  20. Liu Y, Elf SE, Miyata Y, Sashida G, Liu Y, Huang G, Di Giandomenico S, Lee JM, Deblasio A, Menendez S, Antipin J, Reva B, Koff A, Nimer SD (2008). p53 regulates hematopoietic stem cell quiescence. Cell Stem Cell, 4(1), 37-48. (Read full article)
  21. Huang G, Zhang P, Hirai H, Elf S, Yan X, Chen Z, Koschmieder S, Okuno Y, Dayaram T, Growney JD, Shivdasani RA, Gilliland DG, Speck NA, Nimer SD, Tenen DG (2007). PU.1 is a major downstream target of AML1 (RUNX1) in adult mouse hematopoiesis. Nat Genet, 40(1), 51-60. (Read full article)
  22. McBride AE, Zurita-Lopez C, Regis A, Blum E, Conboy A, Elf S, Clarke S (2007). Protein arginine methylation in Candida albicans: role in nuclear transport. Eukaryot Cell, 6(7), 1119-29. (Read full article)
  23. Bassres DS, Levantini E, Ji H, Monti S, Elf S, Dayaram T, Fenyus M, Kocher O, Golub T, Wong KK, Halmos B, Tenen DG (2006). Respiratory failure due to differentiation arrest and expansion of alveolar cells following lung-specific loss of the transcription factor C/EBPalpha in mice. Mol Cell Biol, 26(3), 1109-23. (Read full article)
  24. Iwasaki H, Somoza C, Shigematsu H, Duprez EA, Iwasaki-Arai J, Mizuno S, Arinobu Y, Geary K, Zhang P, Dayaram T, Fenyus ML, Elf S, Chan S, Kastner P, Huettner CS, Murray R, Tenen DG, Akashi K (2005). Distinctive and indispensable roles of PU.1 in maintenance of hematopoietic stem cells and their differentiation. Blood, 106(5), 1590-600. (Read full article)

Review

  1. Lin R, Elf S, Shan C, Kang HB, Ji Q, Zhou L, Hitosugi T, Zhang L, Zhang S, Seo JH, Xie J, Tucker M, Gu TL, Sudderth J, Jiang L, Mitsche M, DeBerardinis RJ, Wu S, Li Y, Mao H, Chen PR, Wang D, Chen GZ, Hurwitz SJ, Lonial S, Arellano ML, Khoury HJ, Khuri FR, Lee BH, Lei Q, Brat DJ, Ye K, Boggon TJ, He C, Kang S, Fan J, Chen J (2015). 6-Phosphogluconate dehydrogenase links oxidative PPP, lipogenesis and tumour growth by inhibiting LKB1-AMPK signalling. [Review]. Nat Cell Biol, 17(11), 1484-96. (Read full article)
  2. Elf SE, Chen J (2013). Targeting glucose metabolism in patients with cancer. [Review]. Cancer, 120(6), 774-80. (Read full article)
  3. Liu Y, Elf SE, Asai T, Miyata Y, Liu Y, Sashida G, Huang G, Di Giandomenico S, Koff A, Nimer SD (2009). The p53 tumor suppressor protein is a critical regulator of hematopoietic stem cell behavior. [Review]. Cell Cycle, 8(19), 3120-4. (Read full article)

Editorial

  1. Elf SE (2021). JAK out of the box: myeloproliferative neoplasms--associated JAK2 V617F mutations contribute to aortic aneurysms. Haematologica, 106(7), 1783-1784. (Read full article)